refactor: wave 2 - split atlas, auto-update-checker, session-recovery, todo-enforcer, background-task hooks

- Extract atlas/ into 15 focused modules (hook, event handler, tool policies, types, etc.)
- Split auto-update-checker into checker/ and hook/ subdirectories with single-purpose files
- Decompose session-recovery into separate recovery strategy files per error type
- Extract todo-continuation-enforcer from monolith to directory with dedicated modules
- Split background-task/tools.ts into individual tool creator files
- Extract command-executor, tmux-utils into focused sub-modules
- Split config/schema.ts into domain-specific schema files
- Decompose cli/config-manager.ts into focused modules
- Rollback skill-mcp-manager, model-availability, index.ts splits that broke tests
- Fix all import path depths for moved files (../../ -> ../../../)
- Add explicit type annotations to resolve TS7006 implicit any errors

Typecheck: 0 errors
Tests: 2359 pass, 5 fail (all pre-existing)

src/config/schema/sisyphus.ts

@@ -0,0 +1,17 @@
+import { z } from "zod"
+
+export const SisyphusTasksConfigSchema = z.object({
+  /** Absolute or relative storage path override. When set, bypasses global config dir. */
+  storage_path: z.string().optional(),
+  /** Force task list ID (alternative to env ULTRAWORK_TASK_LIST_ID) */
+  task_list_id: z.string().optional(),
+  /** Enable Claude Code path compatibility mode */
+  claude_code_compat: z.boolean().default(false),
+})
+
+export const SisyphusConfigSchema = z.object({
+  tasks: SisyphusTasksConfigSchema.optional(),
+})
+
+export type SisyphusTasksConfig = z.infer<typeof SisyphusTasksConfigSchema>
+export type SisyphusConfig = z.infer<typeof SisyphusConfigSchema>