Regenerate AGENTS.md hierarchy with latest codebase state

src/hooks/AGENTS.md

@@ -2,7 +2,7 @@
 
 ## OVERVIEW
 
-41 lifecycle hooks intercepting/modifying agent behavior across 5 events.
+40+ lifecycle hooks intercepting/modifying agent behavior across 5 events.
 
 **Event Types**:
 - `UserPromptSubmit` (`chat.message`) - Can block
@@ -14,10 +14,10 @@
 ## STRUCTURE
 ```
 hooks/
-├── atlas/                      # Main orchestration (757 lines)
+├── atlas/                      # Main orchestration (770 lines)
 ├── anthropic-context-window-limit-recovery/ # Auto-summarize
-├── todo-continuation-enforcer.ts # Force TODO completion
-├── ralph-loop/                 # Self-referential dev loop
+├── todo-continuation-enforcer.ts # Force TODO completion (517 lines)
+├── ralph-loop/                 # Self-referential dev loop (428 lines)
 ├── claude-code-hooks/          # settings.json compat layer - see AGENTS.md
 ├── comment-checker/            # Prevents AI slop
 ├── auto-slash-command/         # Detects /command patterns
@@ -27,13 +27,14 @@ hooks/
 ├── edit-error-recovery/        # Recovers from failures
 ├── thinking-block-validator/   # Ensures valid <thinking>
 ├── context-window-monitor.ts   # Reminds of headroom
-├── session-recovery/           # Auto-recovers from crashes
+├── session-recovery/           # Auto-recovers from crashes (436 lines)
+├── session-notification.ts     # Session event notifications (337 lines)
 ├── think-mode/                 # Dynamic thinking budget
 ├── keyword-detector/           # ultrawork/search/analyze modes
 ├── background-notification/    # OS notification
 ├── prometheus-md-only/         # Planner read-only mode
 ├── agent-usage-reminder/       # Specialized agent hints
-├── auto-update-checker/        # Plugin update check
+├── auto-update-checker/        # Plugin update check (304 lines)
 ├── tool-output-truncator.ts    # Prevents context bloat
 ├── compaction-context-injector/ # Injects context on compaction
 ├── delegate-task-retry/        # Retries failed delegations
@@ -47,6 +48,11 @@ hooks/
 ├── sisyphus-junior-notepad/    # Sisyphus Junior notepad
 ├── stop-continuation-guard/    # Guards stop continuation
 ├── subagent-question-blocker/  # Blocks subagent questions
+├── task-reminder/              # Task progress reminders
+├── tasks-todowrite-disabler/   # Disables TodoWrite when task system active
+├── unstable-agent-babysitter/  # Monitors unstable agent behavior
+├── write-existing-file-guard/  # Guards against overwriting existing files
+├── preemptive-compaction.ts    # Preemptive context compaction
 └── index.ts                    # Hook aggregation + registration
 ```
 
@@ -61,8 +67,8 @@ hooks/
 
 ## EXECUTION ORDER
 - **UserPromptSubmit**: keywordDetector → claudeCodeHooks → autoSlashCommand → startWork
-- **PreToolUse**: subagentQuestionBlocker → questionLabelTruncator → claudeCodeHooks → nonInteractiveEnv → commentChecker → directoryAgentsInjector → directoryReadmeInjector → rulesInjector → prometheusMdOnly → sisyphusJuniorNotepad → atlasHook
-- **PostToolUse**: claudeCodeHooks → toolOutputTruncator → contextWindowMonitor → commentChecker → directoryAgentsInjector → directoryReadmeInjector → rulesInjector → emptyTaskResponseDetector → agentUsageReminder → interactiveBashSession → editErrorRecovery → delegateTaskRetry → atlasHook → taskResumeInfo
+- **PreToolUse**: subagentQuestionBlocker → questionLabelTruncator → claudeCodeHooks → nonInteractiveEnv → commentChecker → directoryAgentsInjector → directoryReadmeInjector → rulesInjector → prometheusMdOnly → sisyphusJuniorNotepad → writeExistingFileGuard → atlasHook
+- **PostToolUse**: claudeCodeHooks → toolOutputTruncator → contextWindowMonitor → commentChecker → directoryAgentsInjector → directoryReadmeInjector → rulesInjector → emptyTaskResponseDetector → agentUsageReminder → interactiveBashSession → editErrorRecovery → delegateTaskRetry → atlasHook → taskResumeInfo → taskReminder
 
 ## HOW TO ADD
 1. Create `src/hooks/name/` with `index.ts` exporting `createMyHook(ctx)`