fix: use ctx.directory instead of process.cwd() in tools for Desktop app support

Convert grep, glob, ast-grep, and session-manager tools from static exports to factory functions that receive PluginInput context. This allows them to use ctx.directory instead of process.cwd(), fixing issue #658 where tools search from wrong directory in OpenCode Desktop app.

Ultraworked with [Sisyphus](https://github.com/code-yeongyu/oh-my-opencode)

Co-authored-by: Sisyphus <clio-agent@sisyphuslabs.ai>

src/tools/session-manager/index.ts

@@ -1,3 +1,3 @@
-export * from "./tools"
+export { createSessionManagerTools } from "./tools"
 export * from "./types"
 export * from "./constants"